DatamintAPI

Contents

  • Installation
    • Next Steps
  • Setup API key
    • Method 1: Command-line tool (recommended)
    • Method 2: Environment variable
    • Method 3: APIHandler constructor
  • Command-line tools
    • Configuring the Datamint settings
    • Uploading DICOMs/resources to Datamint server
      • Example using include and exclude extensions options:
      • Uploading segmentations along with the resources
      • All available options
  • Client Python API
    • Upload DICOMs or other resources
      • Upload resource files
      • Group up resources using channels
      • Upload, anonymize and add a label
      • Changing the uploaded filename
    • Download resources
    • Publishing resources
    • Upload segmentation
  • Running Experiments
    • Manual logging
      • Manual Summary logging
      • Manual Model details logging
    • Best Practices
  • Pytorch integration
    • Dataset

Python Modules Reference

  • datamint.APIHandler
    • APIHandler
      • APIHandler.add_annotations()
      • APIHandler.add_frame_category_annotation()
      • APIHandler.add_image_category_annotation()
      • APIHandler.add_line_annotation()
      • APIHandler.create_project()
      • APIHandler.create_user()
      • APIHandler.delete_project()
      • APIHandler.delete_resources()
      • APIHandler.download_project()
      • APIHandler.download_resource_file()
      • APIHandler.download_resource_frame()
      • APIHandler.get_annotation_worklist()
      • APIHandler.get_annotation_worklist_by_id()
      • APIHandler.get_annotations()
      • APIHandler.get_channels()
      • APIHandler.get_datasets()
      • APIHandler.get_experiment_by_name()
      • APIHandler.get_project_by_id()
      • APIHandler.get_project_by_name()
      • APIHandler.get_projects()
      • APIHandler.get_resource_annotations()
      • APIHandler.get_resources()
      • APIHandler.get_resources_by_ids()
      • APIHandler.get_resources_by_project()
      • APIHandler.get_users()
      • APIHandler.publish_resources()
      • APIHandler.update_annotation_worklist()
      • APIHandler.upload_resources()
      • APIHandler.upload_segmentations()
    • DatamintException
    • ResourceFields
    • ResourceNotFoundError
    • ResourceStatus
  • Dataset Classes
    • DatamintDataset
      • DatamintDataset.__getitem__()
      • DatamintDataset.frame_categories_set
      • DatamintDataset.frame_labels_set
      • DatamintDataset.get_annotations()
      • DatamintDataset.get_dataloader()
      • DatamintDataset.get_framelabel_distribution()
      • DatamintDataset.get_segmentationlabel_distribution()
      • DatamintDataset.image_categories_set
      • DatamintDataset.image_labels_set
      • DatamintDataset.segmentation_labels_set
    • DatamintBaseDataset
      • DatamintBaseDataset.__getitem__()
      • DatamintBaseDataset.__repr__()
      • DatamintBaseDataset.frame_categories_set
      • DatamintBaseDataset.frame_labels_set
      • DatamintBaseDataset.get_annotations()
      • DatamintBaseDataset.get_dataloader()
      • DatamintBaseDataset.get_framelabel_distribution()
      • DatamintBaseDataset.get_segmentationlabel_distribution()
      • DatamintBaseDataset.image_categories_set
      • DatamintBaseDataset.image_labels_set
      • DatamintBaseDataset.segmentation_labels_set
    • DatamintDatasetException
  • datamint.Experiment
    • Experiment
      • Experiment.finish()
      • Experiment.get_dataset()
      • Experiment.get_enviroment_info()
      • Experiment.log_classification_predictions()
      • Experiment.log_dataset_stats()
      • Experiment.log_metric()
      • Experiment.log_metrics()
      • Experiment.log_model()
      • Experiment.log_segmentation_predictions()
      • Experiment.log_semantic_seg_predictions()
      • Experiment.log_summary()
      • Experiment.set_model()
      • Experiment.update_summary_metrics()
DatamintAPI
  • Python Module Index

Python Module Index

d
 
d
- datamint
    datamint.apihandler.api_handler
    datamint.apihandler.base_api_handler
    datamint.dataset.base_dataset
    datamint.dataset.dataset
    datamint.experiment.experiment

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